The following tables provide the source, subject, date obtained from source, and date made available in ImmPort for the reference data.

Reference

Data Source Data Subject Source Date Date Loaded
NCBI Entrez Gene 2015-05-06 2015-05-07
NCBI Taxonomy 2015-05-06 2015-05-07
NCBI dbSNP Build 125 - SNP Flat, NCBI Genome Build 35 - Hg17 2005-11-01 2006-05-05
NCBI dbSNP Build 126 - SNP Flat, NCBI Genome Build 36.1 - Hg18 2006-05-22 2007-11-14
NCBI dbSNP Build 125 - SNP Sequence, NCBI Genome Build 35 - Hg17 2005-11-01 2006-05-05
NCBI dbSNP Build 126 - SNP Sequence, NCBI Genome Build 36.1 - Hg18 2006-05-22 2007-11-14
NCBI Hapmap Project SNP data (Phase I+II) - dbSNP v125, NCBI Build 35 - Hg17 2006-01-20 2006-04-24
NCBI Hapmap Project SNP data (Phase I+II) Release 22 - dbSNP v126, NCBI Build 36 - Hg18 2007-03-01 2007-11-14
NCBI Hapmap Project Genotype data (Phase I+II) - dbSNP v125, NCBI Build 35 - Hg17 2006-01-20 2006-04-24
NCBI Hapmap Project Genotype data (Phase I+II) Release 22 - dbSNP v126, NCBI Build 36 - Hg18 2007-03-01 2007-11-14
NCBI mRNA Sequence 2015-05-06 2015-05-07
NCBI Homologene (Build 68) 2014-04-15 2015-05-07
NCBI - OMIM.ORG OMIM (biocurated at the McKusick-Nathans Institute of Genetic Medicine, The Johns Hopkins University School of Medicine) 2015-05-06 2015-05-07
NCBI PubMed ID and Title Information 2015-05-06 2015-05-07
EBI IMGT HLA data (from Anthony Nolan) Release 3.10.0 2012-10-17 2015-05-07
GO Database GO IDs, GO Terms, Synonyms, Probe->Gene_ID, Graph_Path (latest-full available as of 5/5/2015) 2015-05-05 2015-05-07
BIND BIND Interactions - Complex2subunits - Labels - Refs 2007-12-11 2008-05-20
REACTOME Reactome Human Protein Interactions (Version 52 released 3/23/2015) 2015-03-23 2015-05-07
MIPS MIPS Protein-Protein Interaction Database data 2008-05-12 2008-05-20
KEGG Pathway Information 2011-05-11 2015-05-07
PIR UniProt -to- Entrez_Gene (Release 4.38) 2015-04-29 2015-05-07
UCSC Known Gene (Hg15-Hg19, mm1-mm10, rn1-rn5, galGal2-galGal4, dm1-dm3, susScr2-susScr3, rheMac1-rheMac3, musFur1) 2015-05-07 2015-05-07
UCSC Ref Gene (Hg15-Hg19, mm1-mm10, rn1-rn5, galGal2-galGal4, dm1-dm3, susScr2-susScr3, rheMac1-rheMac3, musFur1) 2015-05-07 2015-05-07
UniProt UniProtKB/Swiss-Prot (Release 2015_05 of 29-Apr-2015) available as of 5/1/2015 2014-03-19 2015-04-29
UTSWMC LD Select Tag SNPs 2006-02-09 2006-02-09
ImmPort Comprehensive List of Immune-Related Genes (keyword search algorithm by UTSWMC) 2015-05-10 2015-05-10
InnateDB InnateDB Data - Curated InnateDB data, plus BIND, DIP, INTACT, MINT data in InnateDB (2009-03-04) 2015-05-07 2015-05-07
Antibody Registry The Antibody Registry - antibodyregistry.org (Latest download as of 07/10/2015) 2015-07-10 2015-07-10


Ontology

Data Source Data Subject Source Date Date Loaded
GO Database Gene Ontology (GO IDs and GO Terms - latest GO monthly full, with gene ontology obo dated 5/16/2015) 2015-05-16 2015-05-17
NCBO BioPortal Cell Type Ontology (structured controlled vocabulary for cell types), Latest maintained cl.obo as of 5/12/2015 2015-05-12 2015-05-17
NCBI Taxonomy Ontology (Cellular Organism - Metazoa only) 2006-01-31 2015-05-17
NCI Thesaurus, MeSH, ICD-9, and ICD-10 Disease Ontology (Immune Disorder, Population, and Personal Attribute) 2005-10-26 2015-05-17



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